Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGINNFMNEVLFFKIFYVPFIILLVAFGYIFLTLRFKFLNIRMFKHAFTILCGKYDTDHHDGHITHFQAFVIALSSTVGLGTVAGVAIAVSMGGPGAIPWMMITGFFGMSAKFAEVTLAFRHRTEGQEQLFSGPFQYIRNGLEEFGFKKLGIILAAVYAVFFVLSGLGGSVAFQTNQMVSILSGYSNWVDSHPWFLSSIISALLALVIIGGIRRIARVSSALVPVMSLIYIFSCITIITFNIHNFSNVFKILFSNMIDFNAVGGGVVGAFVAGIQRAIFASEAGVGSASITHAVAKDEEPVRTGLVAMIEPCFDTMLICCLTGITIVITGAYQTGIGEGILVTQKAFETVSSWFPIFLIIAAPLFAFSSVISFVYCCEMGWLYLFGAKSIVIYRIAVVVVAFFSGLSKDIMAIANIGGTLFSCLALINMTALILFSSQINDEVQCYSKRLRNNKIN |
| 2MES Chain:B ((1-19)) | --------------------------------------------------------------------------------------------------------------MDCLCIVTTKKYRYQDEDT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1184 for 67 contacts (-17.7/contact) +
2D Compatibility (PS) -2149 + (NN) -2648 + (LL) 36064
1D Compatibility (HY) -400 + (ID) 200
Total energy: 29483.0 ( 440.04 by residue)
QMean score : -0.035
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