Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDLTRVANLIKKDV---DKGYRIIVVVSAIAGLTDQMVFQARQTLNLSHKQALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIKTIKIDHLKRSFAEGYTVAIIAGFQGIYDDRITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKEVEGTAVLH--ENDVLERHTITGITYSTNEALITFTNFAN----TLRTLKDMAGANIKIDMI--HGSSIVISEFDI-------------DLMKELLNKNE--DYVINNNAAKISIIGIGVMSVMYHTLKF---FSEKKIEILAITASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 3AB2 Chain:E ((3-405)) | -------------------LVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNPVPPAR---EMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQAGVLT-----------VTPGRVREALDEG-KICIVAGFQ-----------RGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSNDPGTLIAGSMEDIPVEEAVLTGVATDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQVQGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTSEIRISVLIREDDLDAAARALHEQFQLG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272520 for 2807 contacts (-97.1/contact) +
2D Compatibility (PS) -37629 + (NN) -8969 + (LL) 2812
1D Compatibility (HY) -24800 + (ID) 6200
Total energy: -347306.0 ( -123.73 by residue)
QMean score : 0.499
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