Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLEKIQSDVEDIWKNRSKLSNRSVKRAARVIIKKVIKLLDSGKIRVAERLSDGKWIVHTWIKQAISLYFLTEESKMIDHTGW--WFDKVNNKFDGWNEEEFHQSKIRAVPGCFVRQSAYVGTNVVLMPSFINVGAYISSGTMIDTWSTIGSCAQIGKNCHVSGGVGIGGVLEPIQASPVIIEDNCFIGARSEVAEGVIIREGSVLGMGVFIGASTKIIDRETNKVFYGEVPPYSVVVPGSTLSANNI-SIYCAIIVKKVDEKTRQKTSINEILRD
3TK8 Chain:B ((44-299))
---QQLQQIIDNAWENRAELSPKAASAEIREAVAHAIEQLDRGALRVAEKI-DGAWTVHQWLKKAVLLSFRLEDNAPMPAGGYSQFYDKVPSKFANYTAEDFAAGGFRVVPPAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEENSVISMGVYLGQSTKIYDRETGEVTYGRIPAGSVVVAGNLPAKDGTHSLYCAVIVKKV----------------
General information:
TITO was launched using:
RESULT:
Template:
3TK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -231195 for 2030 contacts (-113.9/contact) +
2D Compatibility (PS) -28100 + (NN) -14933 + (LL) 1560
1D Compatibility (HY) -26000 + (ID) 6650
Total energy: -305318.0 ( -150.40 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_3TK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TK8-query.scw
PDB file :
Tito_Scwrl_3TK8.pdb
: