Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNPLEQFKIHTIVELPKLFGHDINFTNSSLFMMISVVSVILFLLLGVRKGAVIPGYLQAAVEYVYDFITSIIESNTGSKGLKHIPLVFTVFTFTLSCNLVGMLPYSFTVTSHVIVTFALSMIVFTYTTIVGFKEKGINFLRILLPEGIPSWLAPMMVFIKLFAYLARPISLSIRLAANMIAGHTIIKVVAGFIMNMHLILTPIPFLFIIALIGFEVFVAILQAYIFTILTCIYLSDAVK
1C17 Chain:M ((95-265))
------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLL-----------PYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWW------SQWILNVPWAIFHILIITLQAFIFMVLTIVYLS----
General information:
TITO was launched using:
RESULT:
Template:
1C17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81696 for 885 contacts (-92.3/contact) +
2D Compatibility (PS) -13992 + (NN) 3491 + (LL) 9084
1D Compatibility (HY) -18800 + (ID) 1850
Total energy: -103763.0 ( -117.25 by residue)
QMean score : -0.077
(partial model without unconserved sides chains):
PDB file :
Tito_1C17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C17-query.scw
PDB file :
Tito_Scwrl_1C17.pdb
: