Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHDIEYIRQNSEEFEKAMESRGMKEF--SAEEILKVDHKKRLLTTKLQDLNR---QRNEITKKIKELKMSKSPCEKQIKSSKNITNEIEAISLKEQMEKDKLVNILSNLPNIPVQGVPIGAGENSNLEVR-------------RYREKRQ-------FDFVPKSHYELGERLGLMDFEQAAKISGSRFAILKGQLAKLGRALINFMLEMHVNEFGYTEVYHPVLVKNEAMYNVGQLPKFSDDSYLTTDE-LRLIPTGEVVLTNSVADKIVEEKKLPIRFTAYSECFRKEAGSAGQSTRGMIRQHQFGKVELVSITTEDQSNDELERMTGVAEEILKRLELPYRVILLCSGDMGFAAQKTYDIEVWLPEQNRYREISSCSNCGNFQARRMNAKYSLEANKKVKKYVHTLNGSALAIGRTIIAVMENYQNPDGSITIPNVLQKYISNGTVISK |
2DQ0 Chain:B ((1-437)) | MLDIKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWR---TKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPSVPVGKDENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEILEWKPKLHVDLLEILGGADFARAAKVSGSRFYYLLNEIVILDLALIRFALDRLI-EKGFTPVIPPYMVRRFVEEGSTSFEDFEDVIYKVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRFRDRTDEK-PRYVHTLNSTAIATSRAIVAILENHQEEDGTVRIPKVLWKYTGFKEIVPV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113364 for 3319 contacts (-34.2/contact) +
2D Compatibility (PS) -44669 + (NN) -21823 + (LL) 516
1D Compatibility (HY) -30800 + (ID) 8500
Total energy: -218640.0 ( -65.88 by residue)
QMean score : 0.410
|
|
|