Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNINKNEFLFLPLGGVGRIGMNVNLYHYRGKWIMIDLGIGFADETMPGIELLIADVSFIAQRKKDLLGIIITHAHEDHCGAVPYLWKE-LQCPIYTTKFTANFLKEKLKEFRLEGMVSVKEVDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVGSALHTGDWKFDQKPIVGLTSNISRLKEIGDKG-NLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKLVAVSLFASNVARIETIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEF-CEVKDVADLPREKLLLICTGCQGEPMAAISKLANKSHHAFKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTEKTECVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGV--EKAIMIAPGDIVNLENGKK--VDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKLLAKPKVFAPGVLEAVEDAAIIQRIIKAVESAFNLQSTKKVRNKIESLIFSILKEYLLKRPIIEVQIEQV |
5A0T Chain:B ((14-452)) | --LPKGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGIDLILPDFTSIRDRLDDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHRIRPY--TLEVAEGHRERVGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDGRLTDLHAFARLSEEGIDLL--LADSTNAEVPGFVPPERDISNVLRQVFANARKRIIVASFASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPDSEVVLVCTGSQGEPMAALSRMANRDHQ-IRIVNGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKGNAKVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVVVDLVEGKAKITGKVQAGYVYVD--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -329509 for 3904 contacts (-84.4/contact) +
2D Compatibility (PS) -46692 + (NN) -17865 + (LL) 10688
1D Compatibility (HY) -34800 + (ID) 7900
Total energy: -426078.0 ( -109.14 by residue)
QMean score : 0.550
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