Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNTIIRKYDIRGVVGKDLQINDGYEIGRKFGQTV-------ANVCVGYDSRIDSPSIEKELIRGLTLSGANVIRIGLCSSPMLYAATQITQADLGIIITASHNPSDYNGFKFFSSEKVYLDQE-TKEIISSSIKN------STKIGSLINVNIYSQYIRVLKSAVK--NNSTQ-KLKIAWDCGNSPASGILRYIETILPGHTHIIINNSIDGVFPLHNPDPIEEKNLVQLIDIVKQDKCDLGIALDGDSDRVRLIDNKGSIVSNDHLFMIFVREVLEECPRSKVIANVKMSMKVHDFVSKLGGQVVTCATGHSLVKKKMVEEGAKFAGELSGHFFFSE-LGFDDGLYSAIKAIDILLKQS-QGLSQMIEDLPKLYITHEVKIVVKDEKKFQIIELIKKTLEQQNIAFSDLDGIKVTGNDNKGWWLLRVSNTQNCITARCEGDTLEDFELTKKVLFRYIDKAKSLDCNLS |
| 1WQA Chain:A ((2-454)) | --GKLFGTFGVRGIANEKITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDVGIAPTPAVQWATKHFNADGGAVITASHNPPEYNGIKLLEPNGMGLKKEREAIVEELFFKEDFDRAKWYEIGEVRREDIIKPYIEAIKSKVDVEAIK-KRKPFVVVDTSNGAGSLTLPYLLRELGCK-VITVNAQPDGYFPARNPEPN-EENLKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKGGGLLVTTVATSNLLDDIAKKHGAKVMRTKVGDLIVARALYENNGTIGGEENGGVIFPEHVLGRDGAMTVAKVVEIFA-KSGKKFSELIDELPKYYQ-IKTKRHVEG-DRHAIVNKVAEMARERGYTVDTTDGAKIIFE--DGWVLVRASGTEPIIRIFSEAKSKEKAQEYLNLGIELLEKALS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238381 for 4042 contacts (-59.0/contact) +
2D Compatibility (PS) -47149 + (NN) -20802 + (LL) 628
1D Compatibility (HY) -21600 + (ID) 6350
Total energy: -333654.0 ( -82.55 by residue)
QMean score : 0.557
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