Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKRNNFNDSYVSVNNRTGFKRSKVCPLATSQDEDIDYKNTDLLSRFTSDYGRILPRRLTGVCAKKQRKLRLAIIRARFLALVPYCTKKV
2VQE Chain:R ((17-86))
--------------------SRKAKV-KATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSGKEQRILAKTIKRARILGLLPFTEKLV
General information:
TITO was launched using:
RESULT:
Template:
2VQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12544 for 425 contacts (-29.5/contact) +
2D Compatibility (PS) -7481 + (NN) -4638 + (LL) 600
1D Compatibility (HY) -2800 + (ID) 1500
Total energy: -28363.0 ( -66.74 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_2VQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VQE-query.scw
PDB file :
Tito_Scwrl_2VQE.pdb
: