Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGVVFSGTQPSGVLHLGNYLGAIKQWVTLQDKYKSIFCIVDLYAITANKLSASELKSNIFKTAAAYIACGIDPEKSIIFNQSTISSHTELSWLLGCYTPVGWLNRMTQFKDKAGSDKQKASLGLYSYPVLMAADILLYRTKYVPVGDDQKQHLELARDIALAFNNHYKLGHFVIPEILVLDHASRIMSLRDGTSKMSKSPPSEYSCINLDDTDDLIVKKVGKAKTDSILGFDFATLKCRPEISNLINIYSVLSNLDVDKVCEEMNKYDMQHFKGELADLIISVISPIREEINDLLKDQSHLYRVLKKGTEKAAEIVGHNIKEIKNIIGFVQ |
| 3FHJ Chain:E ((3-324)) | ---TIFSGIQ-----TIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQ-DPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQ-----------VSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRY----FTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKS-----------------PGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESE-ELDRVLDEGAEKANRVASEMVRKMEQAMGLGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220314 for 2236 contacts (-98.5/contact) +
2D Compatibility (PS) -30341 + (NN) -12278 + (LL) 1820
1D Compatibility (HY) -26000 + (ID) 6500
Total energy: -293613.0 ( -131.31 by residue)
QMean score : 0.517
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