Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNRSTDTKRKEMIELKGPEICTDRSRENLIVCLHGRGSSGNNFVHLAKVMSKSLPNSCFVAPNAPSKREI---G-NGYQWFSLEDRSE--EVLYNGVKNAASIVNHFIDTKLKEFSLKDTQLSLVGFSQGAMLAIHTALTR-PQCCASVVAYSGKFLSPSRVA-PKIKSRPNVCVIHGDADNVVPFSFFDLTVKALKENGVNVEGYPIRTLGHLINKEGIKLGVEFIKKNFKK
3CN9 Chain:A ((15-226))
------------------PLILDAPNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQR-AKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDLALDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL--
General information:
TITO was launched using:
RESULT:
Template:
3CN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136091 for 1700 contacts (-80.1/contact) +
2D Compatibility (PS) -21912 + (NN) -11718 + (LL) 1564
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -180507.0 ( -106.18 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3CN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CN9-query.scw
PDB file :
Tito_Scwrl_3CN9.pdb
: