Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVECAVDSGFATLPVLPLRDVVIFPNIVVPLFIGREKSISALEYAINNRSRQNEIFLVAQQDGSIDNPEPKDLYEVGVLANIVQPLIKLPDNAVKVVIQGVSRGKVIEYIDSHALLQARVELDSYHEYEESEDNVDLEALRRAVINAFDSWCKLNKKNHPEIIVNPVEQIKKIDQLVDTVISYLSIKASDKQSILETYSLEERLKKAFAFIEREISILNAQNRLYKTIKSQVESTQKVYYLNEQLKAIQKELGEFENGEEGNIINEFEKKINEIKLSQEAREKAMTELKRYKKMNPISPEATVISNYLYWLLDLPWGKYKDAKINLNAAKKILDENHYGIEKVKDRIIEFLAVLKRVKEIKGPILCLVGPPGVGKTSLAKSMARAVGRDFVRIALGGVRDESEIRGHRKTYIGSMPGKIIQHMKKANSCNPLFLLDEIDKMGSDSRGDPASALLEVLDTEHNKHFTDHYLEVEFNLSSVMFVATANSL-NLPHPLRDRMEIIQLSGYTEDEKINIAKYHLIPKLKKEHGLRQREWGITNDALYELIRLYTRESGVRSMERELAKLMRKAVKEILAGQNKKISVGVDNLQDYLGVRKYTFGIAEKDSLVGVVTGLAYTETGGDILMIESVLIPGKGEIKYTGKLGEVMQESIKAAYSYVRSNCLFFGIKPEKFKNNDIHLHLPEGAVPKDGPSAGSAVCTSIVSLMTNIPINKNVAMTGEVTLRGRVLAIGGLREKLLAALRGSIKTVIIPGENEKDMQEIPANIKKEINVVFVKNIDEVIKIALIRPTIPIESDNGSSALFSL |
3M6A Chain:E ((10-531)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLG--------------------GRIIQGMKKAGKLNPVFLLDEIDKMS---------AMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3M6A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -282560 for 3973 contacts (-71.1/contact) +
2D Compatibility (PS) -53534 + (NN) -18934 + (LL) 22012
1D Compatibility (HY) -46800 + (ID) 13400
Total energy: -393216.0 ( -98.97 by residue)
QMean score : 0.507
|
|
|