Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MRNTDQQQGLDSKEKSSEDLKPEKKREMKEAAAELKEG--------------------IKKSGAGNQSVGTEVSNQATTQDIDNSKTMEH---
3WX4 Chain:A ((1-98))
MIIDSQSVVQYTFKIDILEKLYKFLPNLYHSIVNELVEELHLENNDFLIGTYKDLSKAGYFYVIPAPGKNIDDVLKTIMIYVHDYEIEDYFELEHHHH
General information:
TITO was launched using:
RESULT:
Template:
3WX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 35102 for 372 contacts (94.4/contact) +
2D Compatibility (PS) -7196 + (NN) 980 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 650
Total energy: 25036.0 ( 67.30 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_3WX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WX4-query.scw
PDB file :
Tito_Scwrl_3WX4.pdb
: