Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISILGAGAWGTAIANSLSGK-QNVILWTHNKTTFESISRTRESDKLL-GCQIPENVSVKLAIKETVNA-SAMIFAVPTQSLRKVCQQLHDCNLKKDVAIILACKGIEKSTLKLPSEIVNEVLPNNPVAIFSGPSFAIEVAKKLPYSMVLACQDDTLGSKLISELQQENIKLHFSSDVVGVQICAALKNVFAIACGIVLGKKLGFNAHAALVTKSMNEVKTLYLAKTDSVSI---DIDTLLGPACLGDLIMTCTSLNSRNLSFGFKIGSSNNSFDAQQTLSEGKSVIEGFSTAQSAFNLAEKLKIKMPICEAVYRLLYESASIEDTISVFVG |
| 3K96 Chain:B ((32-337)) | --IAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPL-IDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRL-------VSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQ---AIEGLYNTDQVHALAQKHAIEMPLTFQVHRILHEDLDPQQAVQELLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271339 for 2685 contacts (-101.1/contact) +
2D Compatibility (PS) -31237 + (NN) -4681 + (LL) 644
1D Compatibility (HY) -24000 + (ID) 5350
Total energy: -335963.0 ( -125.13 by residue)
QMean score : 0.561
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