Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYDFKNVEKFYQDRWD----FSIGKNNEQGKCYVLEMFPYPSGKIHMGHLRNYVIGDVIARYKRACGFEVLHPIGWDAFGLPAENAARDNNVNPAAWTKENIDNMRAQLKSIGLSYNWERELSTCEADYYKHEQKFFLDFLKQGLVYRKKSWVNWDPIDQTVLANEQVVDGKGWRSGAIVEKRELSQWFLKITDFAEDLLECLQGLENWPEKVKMMQDRWIGKSEGVTIEFKIVGLNKKLKVFTTCPHTLFGASFCAVAIEHPIVQDLM--SKEIQDLISSIK------IQGKNNEKVGIYTGLNVKHPFLDKELPLYVANFVLMEYREGAIFGCPAHDQRDFEFAQEYDLPIIPVISSARLGIIPACDQGSYTGSQCQATRMADGLNEEYTNNSIMFNSEFLNGLTVSEARKVIVEKLEEKGIGKKTINYRLHDWGVSRQRYWGCPIPVIYCKNCGTVPVPEEDLPVTLPTDVDFTSGGNPLDKHPTWKFVNCPKCKEQAERETDTFDTFFESSWYFAAF-CSENKS--IDKNACNRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGYFNVKEPFSTLITQGMVC--HVTYKDKNGK--WLFP-------EEAKRLI----TQGAKIQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSNDGVEGCSRYINKLWRMVMQFKP---VVILNQSPVKQVADTEIQKEDMLSHAGMIPDKNVTGKFLGYRKKIHKLLHGLTDDL-ENCRLNCVVAKFREMTNLIAE--IDVKTGKSLINEGICILIRVVEPFIPHLAESLWREIGGEGMLYLQPWPKAAKSLLIDDVVTVAVQINGKLRATIEVAINLHQEELKQIAINS--VSNRVDQSKVRAVYAVSNKIVNIVT |
| 4AQ7 Chain:D ((24-878)) | -QYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNPELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAA-------------DGSEPDLSQQA------LTEKGVLFNSGEFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGMP--ALRETDTFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTAKGDVAALNVD-----ALTENQK--------------------ALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAPTDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -467379 for 6541 contacts (-71.5/contact) +
2D Compatibility (PS) -87146 + (NN) -23540 + (LL) 2448
1D Compatibility (HY) -72400 + (ID) 18450
Total energy: -666467.0 ( -101.89 by residue)
QMean score : 0.478
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