Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKSFILSTGSYLPKKKLGNDEIALMVETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDGNVDVLCTKGGISSTGDSGKIY--MNGREVFKHAVDKLTASIEETLRCNNLKITDIDWLVPHQANIRIIEAVVKKLNFLMEKVINTVDQHANTSAASIPLALDYAIQKPKIKPGSLGILVAIGAGLTWGSVLLRY |
2EFT Chain:B ((5-317)) | -----IIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSG-AVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAAS---------EEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -276338 for 2919 contacts (-94.7/contact) +
2D Compatibility (PS) -32366 + (NN) -7982 + (LL) 772
1D Compatibility (HY) -25600 + (ID) 7550
Total energy: -349064.0 ( -119.58 by residue)
QMean score : 0.437
|
|
|