Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYIQILPETFSIISSLVLLLLGIVFNRRTINLLALGCTVITLIILILSAKDSGFFPFNSLLKLDLYIRSAQGLILIAGILVLLLLNLSKYDYEYEFSILILFTLFGMITLVSANNLISFYLSFELMSIPLYVLASFNKDSVYSCEAGVKYFTLSALSSCIMLYGM-SLLY-GYTG-LVNFSELSSFLENHQMTYGIVFGLVLILIGLCFKLAIAPFHMWAPDVYQGAPTIVTAFFSTVPKAALVTFLIRFFMGEELVGVEKYFQPVLLYISALSVLISAFGALRQRNLKRLLAYSSIGHIGFILASLSIFTRMGTDSSLIYLVIYI--ITNI--GLFSYFIQIDDDDCSVANLSGIGKKRPVLAFHLS-ILLFSMAGIPPLAGFFAKLFIFKSLVNSGFIG-------MSLIFIVASVISCYYYLSIIKAMYFDKPSDSKVIYSKSLFIVTSVASLINI-----VLFMCVEDLYSLIHLVTKSL |
| 4FDW Chain:A ((21-401)) | ASLEDFSIEQ---LPAKTIYALGENIDLTGLNVTGKYDDGKQRPVKVTSEQISGF-------SSSVPVDKQEVTITIEGKQKSFSVHISPVRVENG---VLTEILKGYNEIILPNSV-----------------KSIPKDA----------FRNSQIAKVVLNEGLKSIGDMAFFNSTVQEIVFPSTLE--QLKEDIFYY--------CYNLKKADLS--------------KTKITKLPASTFVY-----------AGIEEVLLPVTLK------EIGSQAFLKTSQLKTIEIPENVSTIG----------QEAFRESGITTVKLPNGVTNIASRAFYYCPELA----EVTTYGSTFNDDPE-----AMIHPYCLEGCPKLARFEIPESI--RILGQGLLGGNRKVTQLTIPANVTQINFSAFNNTGIKEVKVEGTTPPQV-FEKVWYGFPDDITVIRVPAESVEKYKNANGWRDFTNKITTF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -418635 for 2825 contacts (-148.2/contact) +
2D Compatibility (PS) -36425 + (NN) 16006 + (LL) 9828
1D Compatibility (HY) -8400 + (ID) 3600
Total energy: -441226.0 ( -156.19 by residue)
QMean score : 0.141
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