Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKEKLFYTIGEVAEELHLEQHVLRFWESQFRQIKPI-KR-KGRRLYDHKCIEVIKKIKYMLYDKGYTIKGVQKEFDNNIKSSCNFGNLLPQLIDLRDYLINKINSEKSNEQL
1Q06 Chain:A ((1-71))
-------MNISDVAKITGLTSKAIRFYEEK-GLVTPPMRSENGYRTYTQQHLNELTLLRQ-ARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQ
General information:
TITO was launched using:
RESULT:
Template:
1Q06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40335 for 468 contacts (-86.2/contact) +
2D Compatibility (PS) -7136 + (NN) -477 + (LL) 1008
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -49140.0 ( -105.00 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1Q06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q06-query.scw
PDB file :
Tito_Scwrl_1Q06.pdb
: