Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKAGKATKRNKIKRRLRVLARTNILDISNIGYYYIILTHKNIMQASYKNLRKDITICLKKIK
1D6T Chain:A ((3-110))
LEKAYRIKKNADFQRIYKKGH-----SVANRQFVVYTCNNKEI----DHFRLGISVSKKLGNAVLRNKIKRAIRENFKVHKSHI--LAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAK
General information:
TITO was launched using:
RESULT:
Template:
1D6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69459 for 846 contacts (-82.1/contact) +
2D Compatibility (PS) -11536 + (NN) -2560 + (LL) 684
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -86571.0 ( -102.33 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1D6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D6T-query.scw
PDB file :
Tito_Scwrl_1D6T.pdb
: