Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MYQYYNRIFNILLIIVLLLSNVTYADASESMHQIGSDIVVGLLKTEKETYPHELGLFQSIYEMFNSFGVRTVFIDCNKIINLKKIQEELLSLLKQDEMLAKKLILDRIKIEIGQFIKGHKINRIFIPENYYNLHSEPFPPTPCCQLVTEAIVKIVDDNPTIHLLSICGGLQGIMSAKGIEVVHVENFVSDEEQRRSHLKSAPNPQQEDVTFQQIKIVP-NSHLAKVVAKFLLPDKNGWFSTCFPDAHSGTVNNRPENRRKLELLGYKIAAFSNDGVIEAIEDK-HGNIYFQSHPEALVVKSDKNLHLSNHKARQVSTLVAMAIINDFLYRA 2VDJ Chain:A ((30-248)) -------------------------------TQDIRALKIAILNLMPTKQETE----AQLLRLIGNTPLQLDVHLLHMES-----------------------SFY---KTFRDI-ENEKFDGLIITGAP-V-ETLSFEE-VDYWEELKRIMEYSKTN-VTSTLHICWGAQAGLYHHYGVQKY--PLKE-----------------KMFGVFEHEVREQHVKLLQGFDE---------LFFAVHSRHTEVRESDIRE-----VKELTLLANSEEAGVHLVIGQEGRQVFALGHSEYSCDTLKQEYERDRDKGLNIDVPKNYFKHDNPNEKP

General information: TITO was launched using: RESULT: Template: 2VDJ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -50834 for 1590 contacts (-32.0/contact) + 2D Compatibility (PS) -21361 + (NN) -645 + (LL) 8580 1D Compatibility (HY) -4000 + (ID) 950 Total energy: -69210.0 ( -43.53 by residue) QMean score : 0.293

(partial model without unconserved sides chains): PDB file : Tito_2VDJ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2VDJ-query.scw PDB file : Tito_Scwrl_2VDJ.pdb: