Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYDKKMINRINRIQGQLNGVVKMMEEE-KDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVNLLVKSK
3AAI Chain:A ((11-92))
-KVREEARRRLLSAKGHLEGILRMLEDEKVYCVDVLKQLKAVEGALDRVGEMVLRAHLKDH--------D-VEEIVEELMEALK---
General information:
TITO was launched using:
RESULT:
Template:
3AAI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5880 for 329 contacts (17.9/contact) +
2D Compatibility (PS) -6882 + (NN) 3415 + (LL) 1224
1D Compatibility (HY) 1600 + (ID) 400
Total energy: 4837.0 ( 14.70 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_3AAI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AAI-query.scw
PDB file :
Tito_Scwrl_3AAI.pdb
: