Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------MIIYMNTIKNTIYTEAIFSKDEKHRYLLKKTWDEKKPACTVITMYPHLDGVLSLDLTTVLILNQLANSERYGAVYLVNLFSNIKTPENLKHIKEPYDKHTDIHLMKAISESDTVILAY------GAYAKRPVVVERVEQVMEMLKPHKKKVKKLINPATNEIMHPLNPKARQKWTLKA--------------- |
| 4R0G Chain:A ((1-258)) | MLSSTKEYLQALRDGKYLLFLQWPKFIAEYYGQEADEMVSLLIFEWLNNGFCLDDIKKFAILYAVHEMESRPLREGLSYALTTISIALFPCMVYLTNNLQEHYITSKKLSSKEVLQLMTMNNAYLEKQRFVEFLGQEQDKFFTWVKEADSSAVSKAFDQIYSVTYLKYLIEDYLSLLESAHLPTDQLKSSRISLVVRLAKYLHEQTELTQDVHDEIAVYVKKLW-EMQPAEFEEEFLKKISPLPFIDNTVRILT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17468 for 1031 contacts (-16.9/contact) +
2D Compatibility (PS) -17915 + (NN) -5510 + (LL) 44
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -42949.0 ( -41.66 by residue)
QMean score : 0.147
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