Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTQGWWFPVMASAFLIFTIVIMFIAGTGQYGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNKGMISDTILHFSSSIVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTVGIPRFVIVTTYQFGQYAMLFLAPTGLVMA--TLQMLNVRYSHWLRFVWPVVAFVLIFGGGLLITQVLIYS--
4J1V Chain:A ((9-180))----LRQAVMLPE-------------------GEDLNEWIAVNTVDFFNQINMLYGTITEFC-----TEASCPVMSAGPRYEYHWADPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRL-FRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFV---QEFNLIDRRELAPLQELIEKLG


General information:
TITO was launched using:
RESULT:

Template: 4J1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -170005 for 1143 contacts (-148.7/contact) +
2D Compatibility (PS) -16215 + (NN) 662 + (LL) 2972
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -189336.0 ( -165.65 by residue)
QMean score : 0.096

(partial model without unconserved sides chains):
PDB file : Tito_4J1V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J1V-query.scw
PDB file : Tito_Scwrl_4J1V.pdb: