Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE-QPDIILLDLGLPDIDGLSLIQQFRDF-VDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTETIQSR-FTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
1YS7 Chain:B ((26-231))
--------------------GLRLSGFEVATAVDGAEA-LRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGG-P----RLLHTVRGVGFVLR---
General information:
TITO was launched using:
RESULT:
Template:
1YS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140194 for 1614 contacts (-86.9/contact) +
2D Compatibility (PS) -21789 + (NN) -11122 + (LL) 2544
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -189561.0 ( -117.45 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_1YS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YS7-query.scw
PDB file :
Tito_Scwrl_1YS7.pdb
: