Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLSITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFVKLKSILVAILFTSLALTAGTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKK
3I5W Chain:A ((1-32))
------------------------------------------------------------------------------------------------------------------------ATCYCRTGRCATHESLSG--VCEISGRLYRLCCR------
General information:
TITO was launched using:
RESULT:
Template:
3I5W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12422 for 171 contacts (-72.6/contact) +
2D Compatibility (PS) -3607 + (NN) -2225 + (LL) 12252
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -7602.0 ( -44.46 by residue)
QMean score : -0.031
(partial model without unconserved sides chains):
PDB file :
Tito_3I5W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I5W-query.scw
PDB file :
Tito_Scwrl_3I5W.pdb
: