Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MIKRVNKLVLGISFLFLIISIFAGCGTGKEAEIKKSFEK----TLSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIVRSSMS-IQSNGKDMNIKGM-VLYMNRNTRTTNGYYYVDVIEREDKGIHRDNEKRYPVKMVDNKIIPTKEIKDEKIKKEIENFKFFVQYGDFKDLSKYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYNIPTNKAPKLLLKGTGNLKGSSIGYKKIEFTFVEKKGENIYFSDGLHFNPSEDK |
| 4RS2 Chain:A ((9-188)) | HHTDPALRALIRVEIPIDAPGIDALLRRSF---ESDAEAKLVHDLREDGFLTLGLVAT-------------------DDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYR--------------GQGLARQLVYEGLDSLNEF------------------GYAAVVTLGD------------------PALYSRFGFEL------------------AAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRFGLCGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RS2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14667 for 1298 contacts (-11.3/contact) +
2D Compatibility (PS) -17710 + (NN) -1269 + (LL) 4584
1D Compatibility (HY) -6000 + (ID) 1350
Total energy: -36412.0 ( -28.05 by residue)
QMean score : 0.360
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