Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLNTLVLYISFLILIISIVAGCGTGKEAEIKKSFEK---TLSMYPIKNLEDLYDKEGYRD---DEFDKNDKGTWTISSEMAIQKKGEALNIKGMVLKLNRNTRSAKGFYYVNAIKKDENGRPQDKQIEYP--VKMIDNKIIPTKDIKDEKIKKEIENFKFFAQYGNFKDLTKYKGGDISYNPEAPIYSAKYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGSGNLDGSSIGYKKIEFTFVEKKGENTYFTANLHFKPSNDE |
| 2JEO Chain:A ((21-235)) | MR------------PFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIV---------EGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILV----FYSQEIRDMF-HLRLFVDTDSDVRLSRRVLRDVR--------DLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVD-----------------NMVAINLIVQHIQDILNGDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 50405 for 1535 contacts (32.8/contact) +
2D Compatibility (PS) -21700 + (NN) -9456 + (LL) 3172
1D Compatibility (HY) -9600 + (ID) 1600
Total energy: 11221.0 ( 7.31 by residue)
QMean score : 0.191
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