Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MKRLNKLVLG--ISFLFLVISITAGCGMGKEAEIKKSFEKTMS------MYPIK----NLEDLYDKEGYRDDQFDKNDKGTWIVNSQMAIQNKGEPMKSKG-------MVLYMNRNTRTTNGYYYVN-VIKGEDKGKHQDNEKRYPVKMVDNKIILTKEIKDENIKIEIEN----FKFFVQYGNFKDLENYKDGDISYNPEVPSYSA--------KYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKD---------IEFTFVEKKEENIYFSDGLIFKPSEDK---------------------------------------------- |
| 4K7J Chain:A ((26-375)) | GLLTDYGNASASPWMKKLQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDGGIGWVYPANVKGQRMAAVRHNGNWQSLT-SRNNTGDFPLGGILAHTGSGGSMTLTASDGIASKQRVSLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTGAALP-----LTIHTEMPWDIGFINIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNIDIADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVARQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRSA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 62924 for 1917 contacts (32.8/contact) +
2D Compatibility (PS) -26633 + (NN) -1923 + (LL) 440
1D Compatibility (HY) -2400 + (ID) 1850
Total energy: 30558.0 ( 15.94 by residue)
QMean score : 0.158
|
|
|