Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLNKLVLYISFLILVISFTAGCG----MGKEAEIKKSFEKTLSMYPIKNLEDLYDKEGYRDDQ-------FDKNDKGTWIINSEMVVQPKGERMKSKGMVLYMNRNTKTTTGKYIVSETLHDEDGRPKSKDKEYPVKMVDNKIIPTKGIKDENIKKEIENFKFFAQ--YGSFKDLSKYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYKIPTNKAPKLLLKGSGDLKGSSVGYKDIEFTFVEKKGENTFFTDSLHLEPSEDK |
| 3TD7 Chain:A ((35-295)) | HNGLITKIWGTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNNKLEVDYGLSYEDVVNKYESFRAKCGKVTPLDHKAFSFKKLYYMDAPIVSLDKVENFVRIARMRGISDKYFAFLELATVLNGDFNELKK--QSSWEYRNKYAQKKIRHMRENAIPSIEEQGYWKGTPTIDELKLLLFLASNL----------NRTEVNDAINNVERLESTHYIEN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 66943 for 1640 contacts (40.8/contact) +
2D Compatibility (PS) -24531 + (NN) 767 + (LL) 388
1D Compatibility (HY) 0 + (ID) 1950
Total energy: 41617.0 ( 25.38 by residue)
QMean score : 0.163
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