Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALK--SKEDKMIEIRRYLHQHPELSFHEDETAKYIAEFYKGKDVEVETNVGPRGIKVTIDSGKPGKTLAIRADFDALPITED---TGLSFASQNKGVMHACGHDAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGVLDGVDHVLGVHVMSTMKTGNVY--YRPGYVQTGRAFFKLKVQGKGGHGSSPHMANDAIVAGSYFVTALQTVVSRRLSPFETGVVTIGSFDGKGQFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMYGVTCTLEYN-D-DYP--ALYNDPEFTEYVAKTLKEANLDFGVE-MC--EPQPPSEDFAYYAKERPSAFIYTGAAVEDGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN |
| 1XMB Chain:A ((37-427)) | ---KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGT-GEPPFVALRADMDALPIQEGVEWEHKSK---IAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGL-SGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSF--LAGAGVFEAVITGK---------TIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN--------PDSITIGGTLRAFTGFT--QLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDL---LGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169589 for 3145 contacts (-53.9/contact) +
2D Compatibility (PS) -40026 + (NN) -26623 + (LL) 556
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -262582.0 ( -83.49 by residue)
QMean score : 0.540
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