Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MMIGSSFIPLQRVLMYFINPNDSMDQFTLEVLRLPR-ITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGASLSAVVFIAFF-------SHLTIHLLPLFAVLGGAVAMMI-LLVFQTKGQIRPTILIIIGI-SMQTL---------FIALVQGLLITTKQLSAA------KAYTWLVGS-LYGATF-----------KDTIILGMVILAVVPLLFLVIPKMKISILDDPVAIGLG-LHVQRMKLIQLITSTILVSMAISLVG------NIGFVGLIAPHIAKTIVRGSYAKKLLMSAMIGAISIVIADLIGRTLFLPKE-------VPAGVFI-AAFGAPFFIYLLLTVKKL------- |
| 1XIP Chain:A ((1-381)) | ASSLKDEVPTETSEDFGFKFLGQKQILP---SFNEKLPFASLQNLDISNSKSLFVAASGSKAVVGE-LQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGDQVLVSTRNALYSLDLEELSEFRTVTSFEKPVFQLKN-VNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS--PQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGSASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEV---SIWDSKQVIEPSQDSERAVLPISEETDKDTNPIGVAVDVVTSGLPLVYILNNEGSLQIVGLFH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261982 for 2149 contacts (-121.9/contact) +
2D Compatibility (PS) -29358 + (NN) 23250 + (LL) 1496
1D Compatibility (HY) 2800 + (ID) 1900
Total energy: -265694.0 ( -123.64 by residue)
QMean score : 0.048
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