Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDV--VTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPG-LFGVNAGAVFFVIFSITFIQIQSFKMIVVIAFLGAIVVTILVVALGMF--------------------RQTLFSPHRVILAGAAIAMLFTAFTQGILIM------NETDLQGLLFWL-------------------------------------SGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIMLISM-------LAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL------------------------------------------------------------------------------ |
| 1U8V Chain:A ((1-490)) | MLMTAEQYIESLRKLNTRVYMFGEKIENWVDHPMI-RPSINCVRMTYELAQDPQYADLMTTKSNLIGKTINRFANLHQSTDDLRKKVKMQRLLGQKTASCFQRCVGMDAFNAVFSTTYEIDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLRIVEKREDGIVVRGAKAHQTGSINSHEHIIMPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVF-IPNDRIFLCQEYDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADYNGAQKASHVKDKLIEMTHLNETLYCCGIACSAEGYPTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVTMPSEADFKSETVVGRDGETIGDFCNKFFAAAPTCTTEERMRVLRFLENICLGASAVGYRTESMHGAGSPQAQRIMIARQGNINAKKELAKAIAGIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -386230 for 2559 contacts (-150.9/contact) +
2D Compatibility (PS) -33448 + (NN) 3888 + (LL) 128
1D Compatibility (HY) 7200 + (ID) 1900
Total energy: -410362.0 ( -160.36 by residue)
QMean score : 0.278
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