Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MERVLITGGAGFIGSHLVDDL-QQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIKRFIFASSA-AVYGD-LPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEHKDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDIKHSYADISNLK-ALGFVPKYTVETGLK---DYFNFEVDNIEEVTAKEVEMS |
4ZRM Chain:B ((6-307)) | ---ILVTGGAGFIGSHVVDKLIENGYGVIVVDNLSSGKVENLNRNA--LFYEQSIEDEEMMERIFSLHRPEYVFHLAAQASVAISVREPARDAKTNIIGSLVLLEKSIKYG--VKKFIFSSTGGAIYGENVKVFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANVYGPRQDPYGE-AGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAMEKGD--NEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKGDVRKSILDYTKAKEKLGWEPKVSLEEGLKLTVEYF------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -186459 for 2604 contacts (-71.6/contact) +
2D Compatibility (PS) -31101 + (NN) -5303 + (LL) 2352
1D Compatibility (HY) -23200 + (ID) 5950
Total energy: -249661.0 ( -95.88 by residue)
QMean score : 0.476
|
|
|