Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQ-----DPRVLKQIETIKGVTNDYKIVGMNNSQATNRRLENLDCNYRLLGSKVDPKNILS-KLIKRIRFATGVIREIKAFKPDVIHANDFDVLLMVYLS----NYK-KAN-----IVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTV--SHAAKEYYQSKGYKKEANVITNAPILNDSRE-----------FKEIENFKEIVYQGQIVMDRGYEEFIIASSAFKQ---NAPSFIIRGFGPHEEVIKELISYNSENIRLDKPVEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAI--K-ASKILNWQIESERLVELYKF |
| 2X0D Chain:A ((47-413)) | KRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPNPKDL-QSFKS-FKYVMPE--EDKDFALQIV---PFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQW---------SSQYVLAESTYK-YRGPQIAVFNSELLKQYFNNKG--------YNFTDEYFFQPKINTTLKNYINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI-AL--GKGIHLNSLGKLTLEDYADLLKRSSIGISL------MISPHPSYPPLEMAHFGLRVITNKYE-NKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN-------ESSNMMFYINEF---SFIKEIEEKL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110392 for 2398 contacts (-46.0/contact) +
2D Compatibility (PS) -34014 + (NN) -9954 + (LL) 3880
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: -158230.0 ( -65.98 by residue)
QMean score : 0.358
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