Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFSQNLFRCPTPTCIVCRNWESNFSLLGPTPQLALPVEFLFEILCVGAPD
3OGK Chain:B ((34-63))
----------RDSASLVCRRWFKID--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OGK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2674 for 62 contacts (-43.1/contact) +
2D Compatibility (PS) -1543 + (NN) -1140 + (LL) 2644
1D Compatibility (HY) -800 + (ID) 200
Total energy: -3713.0 ( -59.89 by residue)
QMean score : -0.068
(partial model without unconserved sides chains):
PDB file :
Tito_3OGK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OGK-query.scw
PDB file :
Tito_Scwrl_3OGK.pdb
: