Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMENSTTEARNEATMHLDEMTVEEALITMNKEDQQVPLAVRKAIPQLTKVIKKTIAQYKKGGRLIYIGAGTSGRLGVLDAAECVPTFNTDPHEIIGIIAGGQHAMTMAVEGAEDHKKLAEEDLKNIDLTSKDVVIGIAASGKTPYVIGGLTFANTIGATTVSISCNEHAVISEIAQYPVEVKVGPEVLTGSTRLKSGTAQKLILNMISTITMVGVGKVYDNLMIDVKATNQKLIDRSVRIIQEICAITYDEAMALYQVSEHDVKVATVMGMCGISKEEATRRLLNNGDIVKRAIRDRQP |
| 4S12 Chain:B ((11-298)) | ------SESRNPDTMDLDTLSTLEMLTRINDEDRKVPEAIRLVIPNIAQAVDLAAKALRDGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGP-----AVEGAEDDVSLGERDLRDLQLTATDMVVGLAASGRTPYVIGALRFARQLGCPTAAISCNPDSPIAQEALVAISPVVGPEALTGSTRMKSGTAQKLVLNMLSTGAMVKLGKVYQNLMVDVKATNVKLVDRACRIVVEATGASRVEAENALSQTEFEVKPAILMILKGVSVEQARLNLQQHNGYLRAAL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170767 for 2444 contacts (-69.9/contact) +
2D Compatibility (PS) -30053 + (NN) -8214 + (LL) 1224
1D Compatibility (HY) -21600 + (ID) 7150
Total energy: -236560.0 ( -96.79 by residue)
QMean score : 0.536
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