Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVY-SINMNMYTRLLLLDE-NDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGE------RVSAEDVKFSLDRARDKKSVPNNNTYN---------MHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKN-AYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKFKIASPITPLVDTGN----EQRQDLEKVEKAINQ |
| 1DPE Chain:A ((1-337)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTLVYCS-EGSPEGFNPQLFISGTTYDASSVPLYNRLVEFKIGTTEVI--PGLAEKWEVSEDGKTYTFHLRKGVKWH---------DNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELIS--------------------------------EVKKVD-----------DN-TVQFVLTRPEAPFLADLAMDFASILSKEYADAMMK-----AGT------PEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWG------TKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQK-KPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37122 for 2196 contacts (-16.9/contact) +
2D Compatibility (PS) -33260 + (NN) -14730 + (LL) 15116
1D Compatibility (HY) -15600 + (ID) 3200
Total energy: -88796.0 ( -40.44 by residue)
QMean score : 0.423
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