Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGENLLKAIQDVTGLEEHDPVIQAWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQESEDIKSFTVETE-----EYDFSEFTPGQYITVDVSSDKLP--YRAKRHYSIVSGE-KNHLTFGVKRDVTTEH--EGEVSTILHDEIKEGDMINLAAPVGGF-----VLENTTEPQLFLGSGIGVTPLVAMYEAASAKGLDTQM--VQVAENEQHLPFKDNFNSIASHYDNA-KLYTHLKDKQGYIGTEELQAFLANKPEIYICGGTKFLQSMIEALKSLNYDMDRVHYETFIPRLSVAV |
| 4G1B Chain:C ((1-395)) | MLAEKTRSIIKATVPVLEQQGTVITRTFYKNMLTEHTELLNIFNRTNQKVGAQPNALATTVLAAAKNIDDLSVLMDHVKQIGHKHRALQIKPEHYPIVGEYLLKAIKEVLGDAATPEIINAWGEAYQAIADIFITVEKKMYEEALWPGWKPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQENQYDALRHYSLCSASTKNGLRFAVKMEAARENFPAGLVSEYLHKDAKVGDEIKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNPNRPIYWIQSSYDEKTQAFKKHVDELLAECANVDKIIVH-TDTEPLINAAFLKEKSPAHADVYTCGSLAFMQAMIGHLKELEHRDDMIHYEPFGPKMS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208353 for 2976 contacts (-70.0/contact) +
2D Compatibility (PS) -39836 + (NN) -5414 + (LL) 704
1D Compatibility (HY) -30800 + (ID) 8200
Total energy: -291899.0 ( -98.08 by residue)
QMean score : 0.492
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