Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ
2VS0 Chain:B ((7-87))
------SPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQD----------
General information:
TITO was launched using:
RESULT:
Template:
2VS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -954 for 450 contacts (-2.1/contact) +
2D Compatibility (PS) -8881 + (NN) -948 + (LL) 1520
1D Compatibility (HY) -7600 + (ID) 4050
Total energy: -20913.0 ( -46.47 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2VS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VS0-query.scw
PDB file :
Tito_Scwrl_2VS0.pdb
: