Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTLLNVDRVNKQYKDSDFKLQDASLTISTNETVGLIGKNGSGKSTLINILVGNRHKDNGSIAFFGEEHAADDVEYKEHIGVVFDDLRVPNKLTIKD-IDKVFQ--SIYTTWNSQKFFDLIKYFELPL--QTKIKTFSRGMRMKIALTIALSHDVKLLILDEATAGMDVSGREEVMELLEDFVAQ-GGGILISSHISEDIEQLADKLVFMKDGRMILTEQKDILLAQ--------------YGIVTTGDKDVEIPKHLIIASRLSKGKYQILVK---DYAEIENAEPLKHIDDATKIIMRGEV------------------------------------------- |
| 1Z47 Chain:A ((11-355)) | GSMTIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWI-GGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136140 for 2017 contacts (-67.5/contact) +
2D Compatibility (PS) -29936 + (NN) -7800 + (LL) 132
1D Compatibility (HY) -11200 + (ID) 2550
Total energy: -187494.0 ( -92.96 by residue)
QMean score : 0.453
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