Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSL-DKQKFKGAYTIERMNGDKVLFIEPMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKMLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFDHVMNEFNGEVK
4JX9 Chain:A ((4-189))
ISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGPN-FHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQ-GQVPQAMNQINA---
General information:
TITO was launched using:
RESULT:
Template:
4JX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124471 for 1579 contacts (-78.8/contact) +
2D Compatibility (PS) -19232 + (NN) -2190 + (LL) 532
1D Compatibility (HY) -12400 + (ID) 3300
Total energy: -161061.0 ( -102.00 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_4JX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JX9-query.scw
PDB file :
Tito_Scwrl_4JX9.pdb
: