Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKVKDLVFVDDSVKRYK
4CYU Chain:C ((4-160))
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKVKDLVFVDDSVKRY-
General information:
TITO was launched using:
RESULT:
Template:
4CYU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107847 for 1232 contacts (-87.5/contact) +
2D Compatibility (PS) -16567 + (NN) -7550 + (LL) 64
1D Compatibility (HY) -25600 + (ID) 7850
Total energy: -165350.0 ( -134.21 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_4CYU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CYU-query.scw
PDB file :
Tito_Scwrl_4CYU.pdb
: