Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQVTYTHAQLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEVNEHDEFLIAGFNYEGQLAAALQISERPFNL
2JRO Chain:A ((21-58))
---------------------------------------------------------------------------TGVIWVKDLGRLEFEK-GRFLLPRKSLPKVKQAILELNE-----
General information:
TITO was launched using:
RESULT:
Template:
2JRO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16678 for 200 contacts (-83.4/contact) +
2D Compatibility (PS) -4384 + (NN) -1705 + (LL) 5256
1D Compatibility (HY) -4400 + (ID) 450
Total energy: -22361.0 ( -111.81 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_2JRO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JRO-query.scw
PDB file :
Tito_Scwrl_2JRO.pdb
: