Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIISIMAVMLFLTGCGKSQEKATLEKDIDNLQKENKELKDKKEKLQQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKANDKHQS
4LL7 Chain:A ((2-95))
--------------------SRVIESLHDQIDMLTKTNLQLTTQSQNLLSKLELAQSKESKLLENLNLLKNENENLNSIFERKNKKLKELEKDYSELSNRYNEQKEKMDQLSKL-----------------
General information:
TITO was launched using:
RESULT:
Template:
4LL7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 37730 for 373 contacts (101.2/contact) +
2D Compatibility (PS) -10394 + (NN) -4953 + (LL) 2444
1D Compatibility (HY) -2800 + (ID) 900
Total energy: 21127.0 ( 56.64 by residue)
QMean score : 0.746
(partial model without unconserved sides chains):
PDB file :
Tito_4LL7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LL7-query.scw
PDB file :
Tito_Scwrl_4LL7.pdb
: