Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHEQDFRILEGQDITLPELGRELENITGHTIADSTGEIKRVIAHLPNFESDTDTFVATYRLNHQQDFIDATFTALKSDRARLKEVPVHVELISYISKSK
2PZM Chain:A ((239-267))
---GVFNVSTGEGHSIKEVFDVVLDYVGATLA-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2328 for 94 contacts (24.8/contact) +
2D Compatibility (PS) -3111 + (NN) 174 + (LL) 5232
1D Compatibility (HY) -2000 + (ID) 300
Total energy: 2323.0 ( 24.71 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_2PZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PZM-query.scw
PDB file :
Tito_Scwrl_2PZM.pdb
: