Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
3QWD Chain:L ((3-193))--LIPTVIE--------YDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLG---GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPE--


General information:
TITO was launched using:
RESULT:

Template: 3QWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126598 for 1410 contacts (-89.8/contact) +
2D Compatibility (PS) -19607 + (NN) -7074 + (LL) 636
1D Compatibility (HY) -25600 + (ID) 9000
Total energy: -187243.0 ( -132.80 by residue)
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_3QWD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QWD-query.scw
PDB file : Tito_Scwrl_3QWD.pdb: