Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMKKKEKHAIRKKSIGVASVLVGTLIGFGLLSSKEADASENSVTQSDSASNESKSNDSSSVSAAPKTDDTNVSDTKTSSNTNNGETSVAQNPAQQETTQSSSTNATTEETPVTGEATTTTTNQANTPATTQSSNTNAEELVNQTSNETTSNDTNTVSSVNSPQNSTNAENVSTTQDTSTEATPSNNESAPQNTDASNKDVVSQAVNPSTPRMRAFSLAAVAADAPAAGTDITNQLTDVKVT-IDS----GTTVYPHQAGYVKLNYGFSVPNSAVKGDTFKITVPKELNLNGVTSTAKVPPI-MAGDQVLANGVID-SDGNVIYTFTDYVDNKENVTANITMPAYIDPENVTK-TGNVTLTTGIGTNTASKTVLIDYEKYGQFHNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVVLPALTGNLIPNTKSNALIDAKNTDIKVYRVDNANDLSESYYVNPSDFEDVTNQVRISFPNANQYKVEFPTDDDQIT-TPYIVVVNGHIDPAST--GDLALRSTFYGYDSNFIWRSMSWDNEVAFNNGSGSGDGIDKPVVPEQPDEPGEIEPIPEDSDSDPGSDSG--------------------S-DSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLLASLGSLLLFRRKKENKDKK |
| 3IRP Chain:X ((3-379)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSGRNVNHLVFANTSYEILGGGKKYNQVFMTMDGKLKIKIDYTVDDSVVEGDYFTVDFGKYIHPGTSRKPYRVNNIHDANGRTIAIGSYDSATNTAKYTFTNYVDIYNNVRGSFSLLSWPFKELVTTDKQSVPVGITVAGEDYTQNVIFNYGNRTVPVISDI-NY---L--TKDFAEFTTYINQNRAFNTGSKVR--LSG---QGFKFT-SPDEIEVYKVLNNSQFRDSFSPDYANLTQVR-NPKIIINSDGSATVDLG----DIGTLGYIIRSKPNTLPDFSGIGVLKSEYTFTNNKNQR--DTRAHASSIQFVRAEL--------AGFGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIPTQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108290 for 2572 contacts (-42.1/contact) +
2D Compatibility (PS) -37437 + (NN) -20839 + (LL) -2896
1D Compatibility (HY) -10400 + (ID) 2950
Total energy: -182812.0 ( -71.08 by residue)
QMean score : 0.484
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