Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFGVL
3W5A Chain:C ((4-18))
--------------------------------STRELCLNFTVVLIT---------------
General information:
TITO was launched using:
RESULT:
Template:
3W5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2074 for 51 contacts (-40.7/contact) +
2D Compatibility (PS) -1453 + (NN) 676 + (LL) 5776
1D Compatibility (HY) -2400 + (ID) 350
Total energy: 175.0 ( 3.43 by residue)
QMean score : 0.762
(partial model without unconserved sides chains):
PDB file :
Tito_3W5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W5A-query.scw
PDB file :
Tito_Scwrl_3W5A.pdb
: