Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGAD---VICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDN--DNLTDHDLQFIERIEQ---DELFYPLITM-NDEYVADGYIQTKQITRFIDQKLVNE
1ABA Chain:A ((2-83))
FKVYGYDSNIHKCGPCD------NAKRLLTVK--------KQPFEFINIMPEKGVFD-DEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIG-GFDQLR-------------
General information:
TITO was launched using:
RESULT:
Template:
1ABA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57661 for 464 contacts (-124.3/contact) +
2D Compatibility (PS) -7620 + (NN) 980 + (LL) 1904
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -65047.0 ( -140.19 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_1ABA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ABA-query.scw
PDB file :
Tito_Scwrl_1ABA.pdb
: