Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKPEFYALAAGTKSDKDVRMK---FPNHPQVNTVYGEINDIDLDAQIVSVG-NSKIDYDELIIGLGCEDKYHNVPGAEEY---THSIQTLSKARDTFHSISELPEGAKVGIVGAGLS------GIELASELRESRS--DL-----EIYLYDRGPRILR---NFPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIYN-----CDEPKDIDLVVWTAGI-----QPVEVVRNL-PIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLP----------HAPSAQLAEVQGDQIADVLKKQWLNEPLPDKMP-ELKVQGIVGSLGDKQGFAYIM--------DRTVTGRLASILKSGVLWLYKYHNG |
| 3SX6 Chain:A ((4-405)) | SAHVVILGAGTGGMPAAYEMKE-ALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKG--EQTMGTWNAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEKYFIRKM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195164 for 2893 contacts (-67.5/contact) +
2D Compatibility (PS) -38554 + (NN) -21833 + (LL) -412
1D Compatibility (HY) -12400 + (ID) 3300
Total energy: -271663.0 ( -93.90 by residue)
QMean score : 0.476
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