Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNVLLEVKDLETSLKINN--EW---LATVENISFELSKGEVLGIVGESGCGKSILSKSIIKLLPEKISKLSSGEVIFDGKRIDTLNEKQLLDIRGNDIAMIFQEPMTALNPVFTIKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYPHQLSGGMRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLSVVAEFCDKVLVMYAGQIVEFGGIKEILHNPKHPYTQKLLSTIPKLKEGQKRLETIEGIVPSIQAFHVNKCRFANRCNKKLDICNNQSPKMHVCEDVIVRCHLYKNEYKEI |
| 4U02 Chain:C ((1-241)) | ----------MEPIIRIRNLHKWFGPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTI-----NRLEDFQEGEVVVDG--LSVKDDRALREIR-REVGMVFQQ--FNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQ---ARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDL-AQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRV-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168714 for 1964 contacts (-85.9/contact) +
2D Compatibility (PS) -25761 + (NN) -9980 + (LL) 6572
1D Compatibility (HY) -20000 + (ID) 4250
Total energy: -222133.0 ( -113.10 by residue)
QMean score : 0.540
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